Set application which xdg-open uses to open a file

$ mimeopen -d ~/test.pdf

Please choose a default application for files of type application/pdf

    1) E-book Viewer  (calibre-ebook-viewer)
    2) Document Viewer  (evince)
    3) Xournal  (xournal)
    4) GNU Image Manipulation Program  (gimp)
    5) Xpdf PDF Viewer  (xpdf)
    6) Print Preview  (evince-previewer)
    7) Inkscape  (inkscape)
    8) calibre  (calibre-gui)
    9) Other...

use application #2
Opening "/home/saml/Downloads/test.pdf" with Document Viewer  (application/pdf)